5HML	Hydrolase	date	Jan 16, 2016
title	Crystal Structure Of T5 D15 Protein Co-Crystallized With Met
authors	C.S.Flemming, M.Feng, S.E.Sedelnikova, J.Zhang, J.B.Rafferty, J.R P.J.Artymiuk
compound		source
Molecule: Exodeoxyribonuclease Chain: A, B Fragment: Unp Residues 20-291 Synonym: 5'-Exonuclease,T5fen, T5 Flap Endonuclease Ec: 3.1.11.3 Engineered: Yes Mutation: Yes Other_details: Structure Derived From Recombinant Protein Corresponding To Residues 20 - 291 (Known As Delta19 And Ha Mutation Compared To Wt.		Organism_scientific: Escherichia Phage T5 Organism_taxid: 10726 Gene: D15 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: M72 Expression_system_plasmid: Pjonex4
symmetry	Space Group: P 1	R_factor 0.141 R_Free 0.196
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.380 58.380 59.720 66.53 79.48 73.71
method	X-Ray Diffraction	resolution	1.48 Å
ligand	B3P, CL, EDO, IOD, MG	enzyme	Hydrolase E.C.3.1.11.3 BRENDA
Gene Ontology	Chain Function Process Component A, B nuclease activity endonuclease activity exonuclease activity 5'-3' exonuclease activity 5'-3' exodeoxyribonuclease a...
Primary reference	Direct observation of DNA threading in flap endonuclease complexes., AlMalki FA, Flemming CS, Zhang J, Feng M, Sedelnikova SE, Ceska T, Rafferty JB, Sayers JR, Artymiuk PJ, Nat Struct Mol Biol. 2016 Jun 6. doi: 10.1038/nsmb.3241. PMID:27273516

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (209 Kb) [Save to disk] Biological Unit Coordinates (5hml.pdb1.gz) 102 Kb Biological Unit Coordinates (5hml.pdb2.gz) 104 Kb LPC: Ligand-Protein Contacts for 5HML CSU: Contacts of Structural Units for 5HML Structure Factors (6005 Kb) Retrieve 5HML in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5HML from S2C, [Save to disk] Re-refined 5hml structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5HML

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hml_B] [5hml_A] [5hml] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5HML: [53EXOc] [HhH2 ] by SMART

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