5HNX Structural Protein Motor Protein date Jan 19, 2016
title Structural Basis Of Backwards Motion In Kinesin-14: Minus-En Nkn664 In The Nucleotide-Free State
authors H.Shigematsu, T.Yokoyama, M.Kikkawa, M.Shirouzu, R.Nitta
compound source
Molecule: Tubulin Alpha-1b Chain
Chain: A
Synonym: Alpha-Tubulin Ubiquitous,Tubulin K-Alpha-1,Tubulin Ubiquitous Chain;
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Tubulin Beta-2b Chain
Chain: B
Synonym: Beta-Tubulin

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Protein Claret Segregational,Kinesin-1kinesin-14 Claret Segregational;
Chain: K
Fragment: Unp Residues 325-348,Unp Residues 664-700
Engineered: Yes

Organism_scientific: Drosophila Melanogaster, Rattus Norveg
Organism_common: Fruit Fly, Rat
Organism_taxid: 7227, 10116
Gene: Ncd
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 6.60 Å
ligand GDP, GTP, MG, TA1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


K


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk]
  • Biological Unit Coordinates (5hnx.pdb1.gz) 178 Kb
  • LPC: Ligand-Protein Contacts for 5HNX
  • CSU: Contacts of Structural Units for 5HNX
  • Retrieve 5HNX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HNX from S2C, [Save to disk]
  • View 5HNX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HNX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hnx_B] [5hnx_A] [5hnx] [5hnx_K]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 5HNX: [KISc] [Tubulin] [Tubulin_C ] by SMART
  • Other resources with information on 5HNX
  • Community annotation for 5HNX at PDBWiki (http://pdbwiki.org)

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