5HVK	Transferase	date	Jan 28, 2016
title	Crystal Structure Of Limk1 Mutant D460n In Complex With Full Cofilin-1
authors	S.Hamill, T.J.Boggon
compound		source
Molecule: Lim Domain Kinase 1 Chain: A, C Fragment: Unp Residues 329-638 Synonym: Limk-1 Ec: 2.7.11.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Limk1, Limk Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_strain: Sf9 Expression_system_vector_type: Pfastbac Htb
Molecule: Cofilin-1 Chain: B Synonym: 18 Kda Phosphoprotein,P18,Cofilin,Non-Muscle Isofo Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cfl1, Cfl Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet-28a
Molecule: Cofilin-1 Chain: D Synonym: 18 Kda Phosphoprotein,P18,Cofilin,Non-Muscle Isofo Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cfl1, Cfl Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet-28a
symmetry	Space Group: P 21 21 21	R_factor 0.273 R_Free 0.310
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.116 102.283 141.900 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.50 Å
ligand	ANP, MG, SEP, TPO	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	Structural Basis for Noncanonical Substrate Recognition of Cofilin/ADF Proteins by LIM Kinases., Hamill S, Lou HJ, Turk BE, Boggon TJ, Mol Cell. 2016 May 5;62(3):397-408. doi: 10.1016/j.molcel.2016.04.001. PMID:27153537

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk] Biological Unit Coordinates (5hvk.pdb1.gz) 77 Kb Biological Unit Coordinates (5hvk.pdb2.gz) 76 Kb LPC: Ligand-Protein Contacts for 5HVK CSU: Contacts of Structural Units for 5HVK Structure Factors (242 Kb) Retrieve 5HVK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5HVK from S2C, [Save to disk] Re-refined 5hvk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5HVK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5HVK

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hvk_A] [5hvk_C] [5hvk] [5hvk_D] [5hvk_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5HVK: [ADF] [STYKc ] by SMART

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