5HZ7 Dna Binding Protein date Feb 02, 2016
title High-Resolution Crystal Structure Of The Minor Dna-Binding P From Neisseria Meningitidis In Fusion With Mbp
authors J.L.Berry
compound source
Molecule: Comp
Chain: A
Engineered: Yes
Other_details: Comp As A C-Terminal Fusion To Maltose Bindi
 Organism_scientific: Neisseria Meningitidis
Organism_taxid: 487
Gene: Comp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.157 R_Free 0.191
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.570 68.440 109.580 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.43 Å
ligand BGC, EDO, GLC, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA Comparative Structure/Function Analysis of Two Type IV Pilin DNA Receptors Defines a Novel Mode of DNA Binding., Berry JL, Xu Y, Ward PN, Lea SM, Matthews SJ, Pelicic V, Structure. 2016 May 3. pii: S0969-2126(16)30037-5. doi:, 10.1016/j.str.2016.04.001. PMID:27161979
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk]
  • Biological Unit Coordinates (5hz7.pdb1.gz) 253 Kb
  • LPC: Ligand-Protein Contacts for 5HZ7
  • CSU: Contacts of Structural Units for 5HZ7
  • Structure Factors (1108 Kb)
  • Retrieve 5HZ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HZ7 from S2C, [Save to disk]
  • Re-refined 5hz7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5HZ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5HZ7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hz7_A] [5hz7]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5HZ7
  • Community annotation for 5HZ7 at PDBWiki (http://pdbwiki.org)

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