5I0Y Metal Transport date Feb 04, 2016
title Copper-Bound E46q Variant Of Uropathogenic Escherichia Coli Fetp
authors A.C.Chan, M.E.Murphy
compound source
Molecule: Periplasmic Protein-Probably Involved In High-Aff Transport;
Chain: A, B
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli F11
Organism_taxid: 340197
Gene: Ecf11_1994
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: C 1 2 1
R_factor 0.188 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
83.160 36.540 101.000 90.00 106.52 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand CU enzyme
Gene ECF11
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (5i0y.pdb1.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 5I0Y
  • CSU: Contacts of Structural Units for 5I0Y
  • Structure Factors (757 Kb)
  • Retrieve 5I0Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I0Y from S2C, [Save to disk]
  • Re-refined 5i0y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5I0Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5I0Y
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5i0y from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i0y_A] [5i0y_B] [5i0y]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5I0Y
  • Community annotation for 5I0Y at PDBWiki (http://pdbwiki.org)

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