5I8H date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A


D, B


Primary referenceFusion peptide of HIV-1 as a site of vulnerability to neutralizing antibody., Kong R, Xu K, Zhou T, Acharya P, Lemmin T, Liu K, Ozorowski G, Soto C, Taft JD, Bailer RT, Cale EM, Chen L, Choi CW, Chuang GY, Doria-Rose NA, Druz A, Georgiev IS, Gorman J, Huang J, Joyce MG, Louder MK, Ma X, McKee K, O'Dell S, Pancera M, Yang Y, Blanchard SC, Mothes W, Burton DR, Koff WC, Connors M, Ward AB, Kwong PD, Mascola JR, Science. 2016 May 13;352(6287):828-33. doi: 10.1126/science.aae0474. PMID:27174988
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1029 Kb) [Save to disk]
  • Biological Unit Coordinates (5i8h.pdb1.gz) 1507 Kb
  • Biological Unit Coordinates (5i8h.pdb2.gz) 1499 Kb
  • LPC: Ligand-Protein Contacts for 5I8H
  • CSU: Contacts of Structural Units for 5I8H
  • Structure Factors (403 Kb)
  • Retrieve 5I8H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I8H from S2C, [Save to disk]
  • Re-refined 5i8h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5I8H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i8h] [5i8h_A] [5i8h_B] [5i8h_C] [5i8h_D] [5i8h_E] [5i8h_F] [5i8h_G] [5i8h_H] [5i8h_I] [5i8h_J] [5i8h_K] [5i8h_L]
  • SWISS-PROT database:
  • Domains found in 5I8H: [IG_like] [IGv ] by SMART

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