5I8X date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, DLS, NH2, ZDC enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, B, C, A


Primary referenceChemical space guided discovery of antimicrobial bridged bicyclic peptides against Pseudomonas aeruginosa and its biofilms., Di Bonaventura I, Jin X, Visini R, Probst D, Javor S, Gan BH, Michaud G, Natalello A, Doglia SM, Kohler T, van Delden C, Stocker A, Darbre T, Reymond JL, Chem Sci. 2017 Oct 1;8(10):6784-6798. doi: 10.1039/c7sc01314k. Epub 2017 Jul 13. PMID:29147502
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (5i8x.pdb1.gz) 139 Kb
  • LPC: Ligand-Protein Contacts for 5I8X
  • CSU: Contacts of Structural Units for 5I8X
  • Structure Factors (1610 Kb)
  • Retrieve 5I8X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I8X from S2C, [Save to disk]
  • View 5I8X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i8x_A] [5i8x_B] [5i8x_C] [5i8x_D] [5i8x_E]
  • SWISS-PROT database:

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