5I9S MicroED structure of proteinase K at 1.75 A resolution date
authors Hattne, J., Shi, D., Cruz, M.J.de.la., Reyes, F.E., Gonen, T.
compound source
symmetry
R_factor
R_Free 0.2663
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.75
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceModeling truncated pixel values of faint reflections in MicroED images., Hattne J, Shi D, de la Cruz MJ, Reyes FE, Gonen T, J Appl Crystallogr. 2016 May 11;49(Pt 3):1029-1034. eCollection 2016 Jun 1. PMID:27275145
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (5i9s.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 5I9S
  • CSU: Contacts of Structural Units for 5I9S
  • Structure Factors (2538 Kb)
  • Retrieve 5I9S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I9S from S2C, [Save to disk]
    • View 5I9S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5I9S
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5i9s from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i9s_A] [5i9s]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5I9S
  • Community annotation for 5I9S at PDBWiki (http://pdbwiki.org)

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