5IE8 Translation date Feb 25, 2016
title The Pyrazinoic Acid Binding Domain Of Ribosomal Protein S1 F Mycobacterium Tuberculosis
authors B.Huang, X.Liao
compound source
Molecule: 30s Ribosomal Protein S1
Chain: A
Fragment: Unp Residues 280-368
Engineered: Yes
 Organism_scientific: Mycobacterium Leprae (Strain Tn)
Organism_taxid: 272631
Strain: Tn
Gene: Rpsa, Ml1382
Expression_system: Enterobacteria Phage L1
Expression_system_taxid: 268588
Expression_system_vector_type: Vector
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference(1)H, (15)N, (13)C resonance assignments for pyrazinoic acid binding domain of ribosomal protein S1 from Mycobacterium tuberculosis., Huang B, Fu J, Guo C, Wu X, Lin D, Liao X, Biomol NMR Assign. 2016 Oct;10(2):321-4. doi: 10.1007/s12104-016-9692-9. Epub, 2016 Jul 13. PMID:27412769
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (5ie8.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 5IE8
  • Original NMR restraints for 5IE8 from PDB
  • Retrieve 5IE8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IE8 from S2C, [Save to disk]
    • View 5IE8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5IE8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ie8_A] [5ie8]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5IE8: [S1 ] by SMART
    • Other resources with information on 5IE8
  • Community annotation for 5IE8 at PDBWiki (http://pdbwiki.org)

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