5IG5 Transferase date Feb 26, 2016
title Crystal Structure Of N. Vectensis Camkii-B Hub At Ph 4.2
authors M.Bhattacharyya, C.L.Gee, T.Barros, J.Kuriyan
compound source
Molecule: Camkii-B Hub
Chain: A, F, C, D, E, B, G
Fragment: Unp Residues 335-476
Synonym: Predicted Protein
Engineered: Yes
 Organism_scientific: Nematostella Vectensis
Organism_common: Starlet Sea Anemone
Organism_taxid: 45351
Gene: V1g157808
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 31 2 1
R_factor 0.232 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.974 113.974 241.645 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, G, E, B


Primary referenceMolecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II., Bhattacharyya M, Stratton MM, Going CC, McSpadden ED, Huang Y, Susa AC, Elleman A, Cao YM, Pappireddi N, Burkhardt P, Gee CL, Barros T, Schulman H, Williams ER, Kuriyan J, Elife. 2016 Mar 7;5. pii: e13405. doi: 10.7554/eLife.13405. PMID:26949248
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (388 Kb) [Save to disk]
  • Biological Unit Coordinates (5ig5.pdb1.gz) 758 Kb
  • CSU: Contacts of Structural Units for 5IG5
  • Structure Factors (754 Kb)
  • Retrieve 5IG5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IG5 from S2C, [Save to disk]
  • Re-refined 5ig5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5IG5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5IG5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ig5_F] [5ig5_D] [5ig5_A] [5ig5] [5ig5_B] [5ig5_G] [5ig5_E] [5ig5_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5IG5
  • Community annotation for 5IG5 at PDBWiki (http://pdbwiki.org)

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