5II7 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MES, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Basis of Egg Coat-Sperm Recognition at Fertilization., Raj I, Sadat Al Hosseini H, Dioguardi E, Nishimura K, Han L, Villa A, de Sanctis D, Jovine L, Cell. 2017 Jun 15;169(7):1315-1326.e17. doi: 10.1016/j.cell.2017.05.033. PMID:28622512
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (5ii7.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 5II7
  • CSU: Contacts of Structural Units for 5II7
  • Structure Factors (553 Kb)
  • Retrieve 5II7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5II7 from S2C, [Save to disk]
  • Re-refined 5ii7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5II7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5II7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5ii7 from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ii7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5II7
  • Community annotation for 5II7 at PDBWiki (http://pdbwiki.org)

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