OCA Atlas for 5IK2

5IK2

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ADP, GOL, MG, PO4

enzyme

Gene

CATHTA2 ; CATHTA2 ; CATHTA2 ; CATHTA2

Gene
Ontology

Chain	Function	Process	Component
B, J, K, C, A, I
F, E, L, M, N, D
G, O
H, P

Primary reference

Regulation of the thermoalkaliphilic F1-ATPase from Caldalkalibacillus thermarum., Ferguson SA, Cook GM, Montgomery MG, Leslie AG, Walker JE, Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):10860-5. doi:, 10.1073/pnas.1612035113. Epub 2016 Sep 12. PMID:27621435

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1001 Kb) [Save to disk]

Biological Unit Coordinates (5ik2.pdb1.gz) 503 Kb

Biological Unit Coordinates (5ik2.pdb2.gz) 504 Kb

LPC: Ligand-Protein Contacts for 5IK2

CSU: Contacts of Structural Units for 5IK2

Structure Factors (4913 Kb)

Retrieve 5IK2 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5IK2 from S2C, [Save to disk]

Re-refined 5ik2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5IK2 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ik2] [5ik2_A] [5ik2_B] [5ik2_C] [5ik2_D] [5ik2_E] [5ik2_F] [5ik2_G] [5ik2_H] [5ik2_I] [5ik2_J] [5ik2_K] [5ik2_L] [5ik2_M] [5ik2_N] [5ik2_O] [5ik2_P]

SWISS-PROT database:

Domain found in 5IK2: [AAA ] by SMART

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