5IY5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACE, CDL, CHD, CU, CUA, DMU, EDO, FME, HEA, HEC, MG, NA, PEK, PER, PGV, PSC, SAC, TGL, TPO, UNL, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
2, 1


A, N


F, S


H, U


I, V
  • cytochrome-c oxidase activit...


  • K, X


    O, B
  • cytochrome-c oxidase activit...


  • P, C
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


  • Q, D


    R, E


    T, G


    W, J


    Y, L


    Z, M


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1376 Kb) [Save to disk]
  • Biological Unit Coordinates (5iy5.pdb1.gz) 680 Kb
  • Biological Unit Coordinates (5iy5.pdb2.gz) 681 Kb
  • LPC: Ligand-Protein Contacts for 5IY5
  • CSU: Contacts of Structural Units for 5IY5
  • Structure Factors (7410 Kb)
  • Retrieve 5IY5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IY5 from S2C, [Save to disk]
  • Re-refined 5iy5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5IY5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5iy5_T] [5iy5_U] [5iy5_V] [5iy5_W] [5iy5_X] [5iy5_Y] [5iy5_Z] [5iy5] [5iy5_1] [5iy5_2] [5iy5_A] [5iy5_B] [5iy5_C] [5iy5_D] [5iy5_E] [5iy5_F] [5iy5_G] [5iy5_H] [5iy5_I] [5iy5_J] [5iy5_K] [5iy5_L] [5iy5_M] [5iy5_N] [5iy5_O] [5iy5_P] [5iy5_Q] [5iy5_R] [5iy5_S]
  • SWISS-PROT database:

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