5J2T	Cell Cycle	date	Mar 30, 2016
title	Tubulin-Vinblastine Complex
authors	A.B.Waight, K.Bargsten, S.Doronina, M.O.Steinmetz, D.Sussman, A.E
compound		source
Molecule: Tubulin Alpha-1b Chain Chain: A, C Synonym: Alpha-Tubulin Ubiquitous,Tubulin K-Alpha-1,Tubulin Ubiquitous Chain;		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Tissue: Brain
Molecule: Tubulin Beta-2b Chain Chain: D, B		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Tissue: Brain
Molecule: Stathmin-4 Chain: E Synonym: Stathmin-Like Protein B3,Rb3 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Gene: Stmn4 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Tubulin-Tyrosine Ligase Chain: F Engineered: Yes		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Gene: Ttl Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.193 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 105.250 157.740 182.490 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	CA, GDP, GTP, MES, MG, VLB	enzyme
Gene Ontology	Chain Function Process Component A, C D, B E F

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (764 Kb) [Save to disk] Biological Unit Coordinates (5j2t.pdb1.gz) 750 Kb LPC: Ligand-Protein Contacts for 5J2T CSU: Contacts of Structural Units for 5J2T Structure Factors (1304 Kb) Retrieve 5J2T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5J2T from S2C, [Save to disk] Re-refined 5j2t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5J2T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5J2T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5j2t_F] [5j2t_D] [5j2t_A] [5j2t] [5j2t_C] [5j2t_E] [5j2t_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5J2T: [Tubulin] [Tubulin_C ] by SMART

Other resources with information on 5J2T

Community annotation for 5J2T at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---