5J7A date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand LI1, RET enzyme
Gene VNG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceLipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography., Nogly P, Panneels V, Nelson G, Gati C, Kimura T, Milne C, Milathianaki D, Kubo M, Wu W, Conrad C, Coe J, Bean R, Zhao Y, Bath P, Dods R, Harimoorthy R, Beyerlein KR, Rheinberger J, James D, DePonte D, Li C, Sala L, Williams GJ, Hunter MS, Koglin JE, Berntsen P, Nango E, Iwata S, Chapman HN, Fromme P, Frank M, Abela R, Boutet S, Barty A, White TA, Weierstall U, Spence J, Neutze R, Schertler G, Standfuss J, Nat Commun. 2016 Aug 22;7:12314. doi: 10.1038/ncomms12314. PMID:27545823
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (5j7a.pdb1.gz) 214 Kb
  • LPC: Ligand-Protein Contacts for 5J7A
  • CSU: Contacts of Structural Units for 5J7A
  • Structure Factors (370 Kb)
  • Retrieve 5J7A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5J7A from S2C, [Save to disk]
  • Re-refined 5j7a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5J7A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5j7a] [5j7a_A]
  • SWISS-PROT database:
  • Domain found in 5J7A: [Bac_rhodopsin ] by SMART

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