OCA Atlas for 5J9W

5J9W

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACO, ALY

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, J, F	histone acetyltransferase ac...		NuA3 histone acetyltransfera...
I, E, A
K, G, C

Primary reference

The NuA4 Core Complex Acetylates Nucleosomal Histone H4 through a Double Recognition Mechanism., Xu P, Li C, Chen Z, Jiang S, Fan S, Wang J, Dai J, Zhu P, Chen Z, Mol Cell. 2016 Sep 15;63(6):965-75. doi: 10.1016/j.molcel.2016.07.024. Epub 2016 , Sep 1. PMID:27594449

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (786 Kb) [Save to disk]

Biological Unit Coordinates (5j9w.pdb1.gz) 259 Kb

Biological Unit Coordinates (5j9w.pdb2.gz) 257 Kb

Biological Unit Coordinates (5j9w.pdb3.gz) 262 Kb

LPC: Ligand-Protein Contacts for 5J9W

CSU: Contacts of Structural Units for 5J9W

Structure Factors (1297 Kb)

Retrieve 5J9W in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5J9W from S2C, [Save to disk]

Re-refined 5j9w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5J9W in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5j9w_I] [5j9w_J] [5j9w] [5j9w_A] [5j9w_B] [5j9w_C] [5j9w_D] [5j9w_E] [5j9w_F] [5j9w_G] [5j9w_H] [5j9w_K] [5j9w_L]

SWISS-PROT database:

Domain found in 5J9W: [ING ] by SMART

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]