5JCF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructural Analysis of dsRNA Binding to Anti-viral Pattern Recognition Receptors LGP2 and MDA5., Uchikawa E, Lethier M, Malet H, Brunel J, Gerlier D, Cusack S, Mol Cell. 2016 May 19;62(4):586-602. doi: 10.1016/j.molcel.2016.04.021. PMID:27203181
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (496 Kb) [Save to disk]
  • Biological Unit Coordinates (5jcf.pdb1.gz) 246 Kb
  • Biological Unit Coordinates (5jcf.pdb2.gz) 245 Kb
  • LPC: Ligand-Protein Contacts for 5JCF
  • CSU: Contacts of Structural Units for 5JCF
  • Structure Factors (1226 Kb)
  • Retrieve 5JCF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JCF from S2C, [Save to disk]
  • Re-refined 5jcf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5JCF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jcf] [5jcf_A] [5jcf_B] [5jcf_C] [5jcf_D] [5jcf_X] [5jcf_Y]
  • SWISS-PROT database:
  • Domains found in 5JCF: [DEXDc] [HELICc ] by SMART

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