5JKJ
Hydrolase
date
Apr 26, 2016
title
Crystal Structure Of Esterase E22 L374d Mutant
authors
Y.Zhang, P.Wang, Q.Yao
compound
source
Molecule
: Esterase E22
Chain
: A, B
Engineered
: Yes
Organism_scientific
: Uncultured Bacterium
Organism_taxid
: 77133
Expression_system
: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid
: 866768
Expression_system_strain
: Bl21-Gold(De3)Plyss Ag
Expression_system_vector_type
: Plasmid
symmetry
Space Group
: P 1 21 1
R_factor
0.151
R_Free
0.180
crystal
cell
length a
length b
length c
angle alpha
angle beta
angle gamma
58.619
68.898
82.524
90.00
91.11
90.00
method
X-Ray Diffraction
resolution
1.55 Å
Gene
Ontology
Chain
Function
Process
Component
A, B
Data retrieval
Asymmetric unit, PDB entry:
[header only]
[complete with coordinates]
(132 Kb)
[Save to disk]
Biological Unit Coordinates
(5jkj.pdb1.gz) 127 Kb
CSU:
Contacts of Structural Units
for 5JKJ
Structure Factors
(1600 Kb)
Retrieve 5JKJ in
mmCIF
format
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SEQRES to COORDINATES
correlation for
5JKJ
from
S2C
,
[Save to disk]
Re-refined
5jkj
structure from
PDB_REDO
, a databank with updated and optimised macromolecular X-ray diffraction structure models
View 5JKJ in 3D
Proteopedia
, because life has more than 2D.
On
Jmol
, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
On
FirstGlance
, an excellent tool for a guided tour on the structure components, by
E. Martz
.
Visual 3D analysis of 5JKJ
Ramachandran
plot from
PDBSum
Structure-derived information
Electron Density
related parameters from
EDS
Electron Density Server, at Upsala
Dipole
moment, from
Dipole Server
at Weizmann Institute
Sequence-derived information
View one-letter amino acid or nucleotide sequence for each chain:
[5jkj_A]
[5jkj]
[5jkj_B]
SWISS-PROT
database:
Domain
organization of by
SWISSPFAM
Other resources with information on 5JKJ
Community annotation for
5JKJ
at
PDBWiki
(http://pdbwiki.org)
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