5JPQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
0


1

  • cytosolic small ribosomal su...
    • G


    I

  • small-subunit processome
    • U, V
  • ribonuclease P activity


    • X, W


    Y


    Z
  • enzyme activator activity


    • a


    b


    d


    e, f


    h, g


    i, j


    o


    p


    q

  • cytosolic small ribosomal su...
    • r


    s


    t


    u

  • cytosolic small ribosomal su...
    • v

  • cytosolic small ribosomal su...
    • w


    x


    y


    z

  • cytosolic small ribosomal su...
    • Primary referenceArchitecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome., Kornprobst M, Turk M, Kellner N, Cheng J, Flemming D, Kos-Braun I, Kos M, Thoms M, Berninghausen O, Beckmann R, Hurt E, Cell. 2016 Jul 14;166(2):380-93. doi: 10.1016/j.cell.2016.06.014. PMID:27419870
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1903 Kb) [Save to disk]
  • Biological Unit Coordinates (5jpq.pdb1.gz) 1803 Kb
  • CSU: Contacts of Structural Units for 5JPQ
  • Retrieve 5JPQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JPQ from S2C, [Save to disk]
    • View 5JPQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jpq] [5jpq_0] [5jpq_1] [5jpq_2] [5jpq_3] [5jpq_A] [5jpq_B] [5jpq_C] [5jpq_D] [5jpq_E] [5jpq_F] [5jpq_G] [5jpq_H] [5jpq_I] [5jpq_J] [5jpq_K] [5jpq_L] [5jpq_M] [5jpq_N] [5jpq_O] [5jpq_P] [5jpq_Q] [5jpq_R] [5jpq_S] [5jpq_T] [5jpq_U] [5jpq_V] [5jpq_W] [5jpq_X] [5jpq_Y] [5jpq_Z] [5jpq_a] [5jpq_b] [5jpq_c] [5jpq_d] [5jpq_e] [5jpq_f] [5jpq_g] [5jpq_h] [5jpq_i] [5jpq_j] [5jpq_k] [5jpq_l] [5jpq_m] [5jpq_n] [5jpq_o] [5jpq_p] [5jpq_q] [5jpq_r] [5jpq_s] [5jpq_t] [5jpq_u] [5jpq_v] [5jpq_w] [5jpq_x] [5jpq_y] [5jpq_z]
  • SWISS-PROT database:
  • Domains found in 5JPQ: [AARP2CN] [BP28CT] [Brix] [DUF663] [Fibrillarin] [KH] [NOSIC] [PINc] [Ribosomal_S13_N] [Ribosomal_S15] [Ribosomal_S3Ae] [Ribosomal_S4] [Ribosomal_S6e] [S4] [WD40 ] by SMART

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