5JS2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 6NW, 6OO, 6OP, F2T, IPH, MG, PO4, UFT enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • core promoter sequence-speci...
  • translation initiation facto...
  • endoribonuclease activity
  • endoribonuclease activity, p...
  • siRNA binding
  • endoribonuclease activity, c...


  • Primary referenceStructural Analysis of Human Argonaute-2 Bound to a Modified siRNA Guide., Schirle NT, Kinberger GA, Murray HF, Lima WF, Prakash TP, MacRae IJ, J Am Chem Soc. 2016 Jul 20;138(28):8694-7. doi: 10.1021/jacs.6b04454. Epub 2016, Jul 12. PMID:27380263
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (5js2.pdb1.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 5JS2
  • CSU: Contacts of Structural Units for 5JS2
  • Structure Factors (1378 Kb)
  • Retrieve 5JS2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JS2 from S2C, [Save to disk]
  • Re-refined 5js2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5JS2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5js2] [5js2_A] [5js2_B]
  • SWISS-PROT database:
  • Domains found in 5JS2: [DUF1785] [PAZ] [Piwi ] by SMART

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