5JXL Motor Protein date May 13, 2016
title Cryo-Em Structure Of The Flagellar Hook Of Campylobacter Jej
authors H.Matsunami, M.Wolf, F.A.Samatey
compound source
Molecule: Flagellar Hook Protein Flge
Chain: A
Organism_scientific: Campylobacter Jejuni Subsp. Jejuni 811
Organism_taxid: 407148
Strain: 81116
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceComplete structure of the bacterial flagellar hook reveals extensive set of stabilizing interactions., Matsunami H, Barker CS, Yoon YH, Wolf M, Samatey FA, Nat Commun. 2016 Nov 4;7:13425. doi: 10.1038/ncomms13425. PMID:27811912
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk]
  • Biological Unit Coordinates (5jxl.pdb1.gz) 1189 Kb
  • CSU: Contacts of Structural Units for 5JXL
  • Retrieve 5JXL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JXL from S2C, [Save to disk]
  • View 5JXL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5JXL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5jxl from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jxl] [5jxl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5JXL
  • Community annotation for 5JXL at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science