5JZ7	Signaling Protein	date	May 16, 2016
title	Ngf In Complex With Medi578 Scfv
authors	L.L.Olsson, A.Aagaard
compound		source
Molecule: Beta-Nerve Growth Factor Chain: A, B, E, F Synonym: Beta-Ngf Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ngf, Ngfb Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_plasmid: Pet30a
Molecule: Medi578 Scfv, Heavy Chain Chain: C, G, H, J Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Medi578 Scfv, Light Chain Chain: D, I, K, L Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: I 4	R_factor 0.258 R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma 182.085 182.085 109.832 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.40 Å
Gene Ontology	Chain Function Process Component F, A, E, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk] Biological Unit Coordinates (5jz7.pdb1.gz) 110 Kb Biological Unit Coordinates (5jz7.pdb2.gz) 109 Kb CSU: Contacts of Structural Units for 5JZ7 Structure Factors (680 Kb) Retrieve 5JZ7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JZ7 from S2C, [Save to disk] Re-refined 5jz7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JZ7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5JZ7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jz7_J] [5jz7_I] [5jz7_C] [5jz7_E] [5jz7_F] [5jz7_A] [5jz7_G] [5jz7_D] [5jz7_L] [5jz7] [5jz7_H] [5jz7_K] [5jz7_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5JZ7

Community annotation for 5JZ7 at PDBWiki (http://pdbwiki.org)

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