5K3Q date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NO3, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, D, C, A


Primary referenceCrystal structure of the Trim5alpha Bbox2 domain from rhesus macaques describes a plastic oligomerisation interface., Keown JR, Goldstone DC, J Struct Biol. 2016 Jul 9. pii: S1047-8477(16)30145-9. doi:, 10.1016/j.jsb.2016.07.004. PMID:27402535
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (5k3q.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (5k3q.pdb2.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 5K3Q
  • CSU: Contacts of Structural Units for 5K3Q
  • Structure Factors (1644 Kb)
  • Retrieve 5K3Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5K3Q from S2C, [Save to disk]
  • Re-refined 5k3q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5K3Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5k3q] [5k3q_A] [5k3q_B] [5k3q_C] [5k3q_D]
  • SWISS-PROT database:
  • Domain found in 5K3Q: [BBOX ] by SMART

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