5K4J date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 6QB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of (S)-1-(1-(4-Chloro-3-fluorophenyl)-2-hydroxyethyl)-4-(2-((1-methyl-1H-pyrazol-5-y l)amino)pyrimidin-4-yl)pyridin-2(1H)-one (GDC-0994), an Extracellular Signal-Regulated Kinase 1/2 (ERK1/2) Inhibitor in Early Clinical Development., Blake JF, Burkard M, Chan J, Chen H, Chou KJ, Diaz D, Dudley DA, Gaudino JJ, Gould SE, Grina J, Hunsaker T, Liu L, Martinson M, Moreno D, Mueller L, Orr C, Pacheco P, Qin A, Rasor K, Ren L, Robarge K, Shahidi-Latham S, Stults J, Sullivan F, Wang W, Yin J, Zhou A, Belvin M, Merchant M, Moffat J, Schwarz JB, J Med Chem. 2016 Jun 23;59(12):5650-60. doi: 10.1021/acs.jmedchem.6b00389. Epub, 2016 Jun 7. PMID:27227380
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (5k4j.pdb1.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 5K4J
  • CSU: Contacts of Structural Units for 5K4J
  • Structure Factors (463 Kb)
  • Retrieve 5K4J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5K4J from S2C, [Save to disk]
  • Re-refined 5k4j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5K4J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5k4j] [5k4j_A]
  • SWISS-PROT database:
  • Domain found in 5K4J: [S_TKc ] by SMART

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