5K52 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand OCD enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, B, C, A


Primary referenceCrystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012 and Oscillatoria sp. KNUA011., Park AK, Kim IS, Jeon BW, Roh SJ, Ryu MY, Baek HR, Jo SW, Kim YS, Park H, Lee JH, Yoon HS, Kim HW, Biochem Biophys Res Commun. 2016 Aug 26;477(3):395-400. doi:, 10.1016/j.bbrc.2016.06.090. Epub 2016 Jun 18. PMID:27329814
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (5k52.pdb1.gz) 38 Kb
  • Biological Unit Coordinates (5k52.pdb2.gz) 37 Kb
  • Biological Unit Coordinates (5k52.pdb3.gz) 38 Kb
  • Biological Unit Coordinates (5k52.pdb4.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 5K52
  • CSU: Contacts of Structural Units for 5K52
  • Structure Factors (1070 Kb)
  • Retrieve 5K52 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5K52 from S2C, [Save to disk]
  • Re-refined 5k52 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5K52 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5k52] [5k52_A] [5k52_B] [5k52_C] [5k52_D]
  • SWISS-PROT database:

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