5K5F Dna Binding Protein date May 23, 2016
title Nmr Structure Of The Hltf Hiran Domain
authors I.Bezsonova, D.Neculai, D.Korzhnev, J.Weigelt, C.Bountra, A.Edwar C.Arrowsmith, S.Dhe-Paganon, Structural Genomics Consortium (
compound source
Molecule: Helicase-Like Transcription Factor
Chain: A
Fragment: Residues 51-171
Synonym: Dna-Binding Proteinplasminogen Activator Inhibito Regulator,Hip116,Ring Finger Protein 80,Swisnf-Related Mat Associated Actin-Dependent Regulator Of Chromatin Subfamily 3,Sucrose Nonfermenting Protein 2-Like 3;
Ec: 3.6.4.-,6.3.2.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hltf, Hip116a, Rnf80, Smarca3, Snf2l3, Zbu1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.4 BRENDA
note 5K5F supersedes 2L1I
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (624 Kb) [Save to disk]
  • Biological Unit Coordinates (5k5f.pdb1.gz) 32 Kb
  • CSU: Contacts of Structural Units for 5K5F
  • Original NMR restraints for 5K5F from PDB
  • Retrieve 5K5F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5K5F from S2C, [Save to disk]
    • View 5K5F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5K5F
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5k5f] [5k5f_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5K5F: [HIRAN ] by SMART
    • Other resources with information on 5K5F
  • Community annotation for 5K5F at PDBWiki (http://pdbwiki.org)

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