5K8B		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, NA, PDG	enzyme
Gene	SO
Gene Ontology	Chain Function Process Component A, B, C, D
Primary reference	Structures of KdnB and KdnA from Shewanella oneidensis: Key Enzymes in the Formation of 8-Amino-3,8-Dideoxy-D-Manno-Octulosonic Acid., Zachman-Brockmeyer TR, Thoden JB, Holden HM, Biochemistry. 2016 Jun 8. PMID:27275764

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (263 Kb) [Save to disk] Biological Unit Coordinates (5k8b.pdb1.gz) 131 Kb Biological Unit Coordinates (5k8b.pdb2.gz) 130 Kb LPC: Ligand-Protein Contacts for 5K8B CSU: Contacts of Structural Units for 5K8B Structure Factors (1790 Kb) Retrieve 5K8B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5K8B from S2C, [Save to disk] Re-refined 5k8b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5K8B in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5k8b] [5k8b_A] [5k8b_B] [5k8b_C] [5k8b_D] SWISS-PROT database:

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