5K8R		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, CL, EDO, EPE, NA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Antiparallel protocadherin homodimers use distinct affinity- and specificity-mediating regions in cadherin repeats 1-4., Nicoludis JM, Vogt BE, Green AG, Scharfe CP, Marks DS, Gaudet R, Elife. 2016 Jul 29;5. pii: e18449. doi: 10.7554/eLife.18449. PMID:27472898

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (5k8r.pdb1.gz) 135 Kb LPC: Ligand-Protein Contacts for 5K8R CSU: Contacts of Structural Units for 5K8R Structure Factors (143 Kb) Retrieve 5K8R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5K8R from S2C, [Save to disk] Re-refined 5k8r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5K8R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5k8r] [5k8r_A] SWISS-PROT database: Domain found in 5K8R: [CA ] by SMART

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