5KAQ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NAG	enzyme
Gene Ontology	Chain Function Process Component C, B, A
Primary reference	Vaccine-Induced Antibodies that Neutralize Group 1 and Group 2 Influenza A Viruses., Joyce MG, Wheatley AK, Thomas PV, Chuang GY, Soto C, Bailer RT, Druz A, Georgiev IS, Gillespie RA, Kanekiyo M, Kong WP, Leung K, Narpala SN, Prabhakaran MS, Yang ES, Zhang B, Zhang Y, Asokan M, Boyington JC, Bylund T, Darko S, Lees CR, Ransier A, Shen CH, Wang L, Whittle JR, Wu X, Yassine HM, Santos C, Matsuoka Y, Tsybovsky Y, Baxa U, Mullikin JC, Subbarao K, Douek DC, Graham BS, Koup RA, Ledgerwood JE, Roederer M, Shapiro L, Kwong PD, Mascola JR, McDermott AB, Cell. 2016 Jul 28;166(3):609-23. doi: 10.1016/j.cell.2016.06.043. Epub 2016 Jul, 21. PMID:27453470

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (952 Kb) [Save to disk] Biological Unit Coordinates (5kaq.pdb1.gz) 937 Kb LPC: Ligand-Protein Contacts for 5KAQ CSU: Contacts of Structural Units for 5KAQ Structure Factors (2154 Kb) Retrieve 5KAQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KAQ from S2C, [Save to disk] Re-refined 5kaq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KAQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kaq] [5kaq_A] [5kaq_B] [5kaq_C] [5kaq_F] [5kaq_G] [5kaq_H] [5kaq_L] [5kaq_Q] [5kaq_R] SWISS-PROT database:

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