5KCA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
Primary referenceStructural basis for integration of GluD receptors within synaptic organizer complexes., Elegheert J, Kakegawa W, Clay JE, Shanks NF, Behiels E, Matsuda K, Kohda K, Miura E, Rossmann M, Mitakidis N, Motohashi J, Chang VT, Siebold C, Greger IH, Nakagawa T, Yuzaki M, Aricescu AR, Science. 2016 Jul 15;353(6296):295-9. doi: 10.1126/science.aae0104. PMID:27418511
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (5kca.pdb1.gz) 502 Kb
  • LPC: Ligand-Protein Contacts for 5KCA
  • CSU: Contacts of Structural Units for 5KCA
  • Structure Factors (674 Kb)
  • Retrieve 5KCA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KCA from S2C, [Save to disk]
  • Re-refined 5kca structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5KCA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kca] [5kca_A]
  • SWISS-PROT database:
  • Domain found in 5KCA: [C1Q ] by SMART

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