5KCD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceFull antagonism of the estrogen receptor without a prototypical ligand side chain., Srinivasan S, Nwachukwu JC, Bruno NE, Dharmarajan V, Goswami D, Kastrati I, Novick S, Nowak J, Cavett V, Zhou HB, Boonmuen N, Zhao Y, Min J, Frasor J, Katzenellenbogen BS, Griffin PR, Katzenellenbogen JA, Nettles KW, Nat Chem Biol. 2017 Jan;13(1):111-118. doi: 10.1038/nchembio.2236. Epub 2016 Nov , 21. PMID:27870835
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk]
  • Biological Unit Coordinates (5kcd.pdb1.gz) 164 Kb
  • CSU: Contacts of Structural Units for 5KCD
  • Structure Factors (534 Kb)
  • Retrieve 5KCD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KCD from S2C, [Save to disk]
  • Re-refined 5kcd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5KCD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kcd] [5kcd_A] [5kcd_B] [5kcd_C] [5kcd_D]
  • SWISS-PROT database:
  • Domain found in 5KCD: [HOLI ] by SMART

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