5KD7 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
G, D, J, B


Primary referenceEffects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity., Frey BF, Jiang J, Sui Y, Boyd LF, Yu B, Tatsuno G, Billeskov R, Solaymani-Mohammadi S, Berman PW, Margulies DH, Berzofsky JA, J Immunol. 2018 Jan 26. pii: jimmunol.1701523. doi: 10.4049/jimmunol.1701523. PMID:29374075
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (533 Kb) [Save to disk]
  • Biological Unit Coordinates (5kd7.pdb1.gz) 134 Kb
  • Biological Unit Coordinates (5kd7.pdb2.gz) 135 Kb
  • Biological Unit Coordinates (5kd7.pdb3.gz) 135 Kb
  • Biological Unit Coordinates (5kd7.pdb4.gz) 129 Kb
  • LPC: Ligand-Protein Contacts for 5KD7
  • CSU: Contacts of Structural Units for 5KD7
  • Structure Factors (878 Kb)
  • Retrieve 5KD7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KD7 from S2C, [Save to disk]
    • View 5KD7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kd7_A] [5kd7_B] [5kd7_C] [5kd7_D] [5kd7_E] [5kd7_F] [5kd7_G] [5kd7_H] [5kd7_I] [5kd7_J] [5kd7_K] [5kd7_P]
  • SWISS-PROT database:

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