5KDQ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	HEM, KOH, PO4	enzyme
Gene Ontology	Chain Function Process Component A, C peroxidase activity B, D peroxidase activity
Primary reference	Aryloxyalkanoic Acids as Non-Covalent Modifiers of the Allosteric Properties of Hemoglobin., Omar AM, Mahran MA, Ghatge MS, Bamane FH, Ahmed MH, El-Araby ME, Abdulmalik O, Safo MK, Molecules. 2016 Aug 13;21(8). pii: E1057. doi: 10.3390/molecules21081057. PMID:27529207

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk] Biological Unit Coordinates (5kdq.pdb1.gz) 98 Kb LPC: Ligand-Protein Contacts for 5KDQ CSU: Contacts of Structural Units for 5KDQ Structure Factors (574 Kb) Retrieve 5KDQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KDQ from S2C, [Save to disk] Re-refined 5kdq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KDQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kdq] [5kdq_A] [5kdq_B] [5kdq_C] [5kdq_D] SWISS-PROT database:

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