5KER date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HEM enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, H, B, F


E, C, A, G


Primary referenceAlteration of the alpha1beta2/alpha2beta1 subunit interface contributes to the increased hemoglobin-oxygen affinity of high-altitude deer mice., Inoguchi N, Mizuno N, Baba S, Kumasaka T, Natarajan C, Storz JF, Moriyama H, PLoS One. 2017 Mar 31;12(3):e0174921. doi: 10.1371/journal.pone.0174921., eCollection 2017. PMID:28362841
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (199 Kb) [Save to disk]
  • Biological Unit Coordinates (5ker.pdb1.gz) 96 Kb
  • Biological Unit Coordinates (5ker.pdb2.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 5KER
  • CSU: Contacts of Structural Units for 5KER
  • Structure Factors (702 Kb)
  • Retrieve 5KER in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KER from S2C, [Save to disk]
  • Re-refined 5ker structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5KER in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ker] [5ker_A] [5ker_B] [5ker_C] [5ker_D] [5ker_E] [5ker_F] [5ker_G] [5ker_H]
  • SWISS-PROT database:

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