5KH7		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	6T7, UNX, ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin., Harding RJ, Ferreira de Freitas R, Collins P, Franzoni I, Ravichandran M, Ouyang H, Juarez-Ornelas KA, Lautens M, Schapira M, von Delft F, Santhakumar V, Arrowsmith CH, J Med Chem. 2017 Nov 9;60(21):9090-9096. doi: 10.1021/acs.jmedchem.7b00933. Epub , 2017 Oct 27. PMID:29019676

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (5kh7.pdb1.gz) 20 Kb LPC: Ligand-Protein Contacts for 5KH7 CSU: Contacts of Structural Units for 5KH7 Structure Factors (1895 Kb) Retrieve 5KH7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KH7 from S2C, [Save to disk] Re-refined 5kh7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KH7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kh7] [5kh7_A] SWISS-PROT database: Domain found in 5KH7: [ZnF_UBP ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---