5KOV		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NAG	enzyme
Primary reference	Structure of a Human Astrovirus Capsid - Antibody Complex and Mechanistic Insights into Virus Neutralization., Bogdanoff WA, Campos J, Perez EI, Yin L, Alexander DL, DuBois RM, J Virol. 2016 Nov 2. pii: JVI.01859-16. PMID:27807234

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1105 Kb) [Save to disk] Biological Unit Coordinates (5kov.pdb1.gz) 298 Kb Biological Unit Coordinates (5kov.pdb2.gz) 298 Kb Biological Unit Coordinates (5kov.pdb3.gz) 253 Kb Biological Unit Coordinates (5kov.pdb4.gz) 263 Kb LPC: Ligand-Protein Contacts for 5KOV CSU: Contacts of Structural Units for 5KOV Structure Factors (1423 Kb) Retrieve 5KOV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KOV from S2C, [Save to disk] Re-refined 5kov structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KOV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kov_I] [5kov_W] [5kov_U] [5kov] [5kov_A] [5kov_B] [5kov_C] [5kov_E] [5kov_G] [5kov_H] [5kov_K] [5kov_M] [5kov_N] [5kov_O] [5kov_Q] [5kov_S] [5kov_T] SWISS-PROT database: Domain found in 5KOV: [IGv ] by SMART

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