5KQG Hydrolase Hydrolase Inhibitor date Jul 06, 2016
title Co-Crystal Structure Of Lmw-Ptp In Complex With 2-(Benzothia Ylamino)-2-Oxo-1-Phenylethanesulfonic Acid
authors J.Wang, Z.Y.Zhang, Z.H.Yu
compound source
Molecule: Low Molecular Weight Phosphotyrosine Protein Phos
Chain: A
Synonym: Lmw-Ptpase,Adipocyte Acid Phosphatase,Low Molecula Cytosolic Acid Phosphatase,Red Cell Acid Phosphatase 1;
Ec: 3.1.3.48,3.1.3.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Acp1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 21 21 21
R_factor 0.167 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.801 53.963 97.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand 6VX enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein tyrosine phosphatase...
  • non-membrane spanning protei...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (5kqg.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 5KQG
  • CSU: Contacts of Structural Units for 5KQG
  • Structure Factors (752 Kb)
  • Retrieve 5KQG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KQG from S2C, [Save to disk]
  • Re-refined 5kqg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5KQG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5KQG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kqg_A] [5kqg]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5KQG: [LMWPc ] by SMART
  • Other resources with information on 5KQG
  • Community annotation for 5KQG at PDBWiki (http://pdbwiki.org)

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