5KX8	Transferase Transferase Inhibitor	date	Jul 20, 2016
title	Irak4-Inhibitor Co-Structure
authors	T.O.Fischmann
compound		source
Molecule: Interleukin-1 Receptor-Associated Kinase 4 Chain: A, B, C, D Fragment: Kinase Domain (Unp Residues 160-460) Synonym: Irak-4,Renal Carcinoma Antigen Ny-Ren-64 Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Irak4 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf21 Expression_system_vector_type: Baculovirus
symmetry	Space Group: C 1 2 1	R_factor 0.204 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 142.700 139.880 87.440 90.00 125.25 90.00
method	X-Ray Diffraction	resolution	2.67 Å
ligand	6YE, SEP, TPO	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk] Biological Unit Coordinates (5kx8.pdb1.gz) 50 Kb Biological Unit Coordinates (5kx8.pdb2.gz) 49 Kb Biological Unit Coordinates (5kx8.pdb3.gz) 50 Kb Biological Unit Coordinates (5kx8.pdb4.gz) 49 Kb LPC: Ligand-Protein Contacts for 5KX8 CSU: Contacts of Structural Units for 5KX8 Structure Factors (478 Kb) Retrieve 5KX8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KX8 from S2C, [Save to disk] Re-refined 5kx8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KX8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5KX8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kx8_A] [5kx8_C] [5kx8] [5kx8_B] [5kx8_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5KX8: [STYKc ] by SMART

Other resources with information on 5KX8

Community annotation for 5KX8 at PDBWiki (http://pdbwiki.org)

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