5KXB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, CA, FUC, MAN, MN, NAG, NGA, XYP enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, B, D, A


Primary referenceMolecular basis for recognition of the cancer glycobiomarker LacdiNAc (GalNAc(beta1-4)GlcNAc) by Wisteria floribunda agglutinin., Haji-Ghassemi O, Gilbert M, Spence J, Schur MJ, Parker MJ, Jenkins ML, Burke JE, van Faassen H, Young NM, Evans SV, J Biol Chem. 2016 Sep 6. pii: jbc.M116.750463. PMID:27601469
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (5kxb.pdb1.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 5KXB
  • CSU: Contacts of Structural Units for 5KXB
  • Structure Factors (780 Kb)
  • Retrieve 5KXB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KXB from S2C, [Save to disk]
  • Re-refined 5kxb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5KXB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kxb] [5kxb_A] [5kxb_B] [5kxb_C] [5kxb_D]
  • SWISS-PROT database:

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