5KYT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, SLU enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCloning of the Orange Light-Producing Luciferase from Photinus scintillans - A New Proposal on how Bioluminescence Color is Determined., Branchini BR, Southworth TL, Fontaine DM, Murtiashaw MH, McGurk A, Talukder MH, Qureshi R, Yetil D, Sundlov JA, Gulick AM, Photochem Photobiol. 2016 Nov 18. doi: 10.1111/php.12671. PMID:27861940
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (185 Kb) [Save to disk]
  • Biological Unit Coordinates (5kyt.pdb1.gz) 90 Kb
  • Biological Unit Coordinates (5kyt.pdb2.gz) 92 Kb
  • LPC: Ligand-Protein Contacts for 5KYT
  • CSU: Contacts of Structural Units for 5KYT
  • Structure Factors (1725 Kb)
  • Retrieve 5KYT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KYT from S2C, [Save to disk]
  • Re-refined 5kyt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5KYT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kyt] [5kyt_A] [5kyt_B]
  • SWISS-PROT database:

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