5LCP Transferase date Jun 22, 2016
title Cocrystal Structure Of Camp-Dependent Protein Kinase (Pka) I With Fasudil (M77)
authors B.Wienen-Schmidt, A.Heine, G.Klebe
compound source
Molecule: Camp-Dependent Protein Kinase Catalytic Subunit A
Chain: A
Synonym: Pka C-Alpha
Ec: 2.7.11.11
Engineered: Yes
Other_details: Phosphorylated At Ser11, Thr198, Ser339
 Organism_scientific: Cricetulus Griseus
Organism_common: Chinese Hamster
Organism_taxid: 10029
Gene: Prkaca
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Camp-Dependent Protein Kinase Inhibitor Alpha
Chain: B
Synonym: Pki-Alpha,Camp-Dependent Protein Kinase Inhibitor, Musclebrain Isoform;
Engineered: Yes
Other_details: Amino Acids 5-24 From Camp-Dependent Protein
Inhibitor Alpha From Sigma (Order Id: P7739)
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.133 R_Free 0.166
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.394 72.832 109.272 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.43 Å
ligand DMS, M77, MOH, SEP, TPO enzyme Transferase E.C.2.7.11.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (209 Kb) [Save to disk]
  • Biological Unit Coordinates (5lcp.pdb1.gz) 203 Kb
  • LPC: Ligand-Protein Contacts for 5LCP
  • CSU: Contacts of Structural Units for 5LCP
  • Structure Factors (770 Kb)
  • Retrieve 5LCP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LCP from S2C, [Save to disk]
    • View 5LCP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5LCP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lcp_B] [5lcp_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5LCP
  • Community annotation for 5LCP at PDBWiki (http://pdbwiki.org)

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