5LDD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
Gene CTHT ; CTHT ; CTHT
Gene
Ontology
ChainFunctionProcessComponent
C, F


D, A


E, B


Primary referenceArchitecture and mechanism of the late endosomal Rab7-like Ypt7 guanine nucleotide exchange factor complex Mon1-Ccz1., Kiontke S, Langemeyer L, Kuhlee A, Schuback S, Raunser S, Ungermann C, Kummel D, Nat Commun. 2017 Jan 4;8:14034. doi: 10.1038/ncomms14034. PMID:28051187
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (330 Kb) [Save to disk]
  • Biological Unit Coordinates (5ldd.pdb1.gz) 164 Kb
  • Biological Unit Coordinates (5ldd.pdb2.gz) 158 Kb
  • LPC: Ligand-Protein Contacts for 5LDD
  • CSU: Contacts of Structural Units for 5LDD
  • Structure Factors (861 Kb)
  • Retrieve 5LDD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LDD from S2C, [Save to disk]
  • Re-refined 5ldd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5LDD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ldd_D] [5ldd_C] [5ldd_E] [5ldd_F] [5ldd] [5ldd_A] [5ldd_B]
  • SWISS-PROT database:

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