5LF1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, 6V1, 6VC, CL, K, MG, YCM enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, R


I, W


O, A


P, B


Q, C


S, E


T, F


U, G
  • positive regulation of NF-ka...

    • V, H, b, N


    X, J


    Y, K


    Z, L


    a, M


    Primary referenceThe inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design., Schrader J, Henneberg F, Mata RA, Tittmann K, Schneider TR, Stark H, Bourenkov G, Chari A, Science. 2016 Aug 5;353(6299):594-8. doi: 10.1126/science.aaf8993. PMID:27493187
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2071 Kb) [Save to disk]
  • Biological Unit Coordinates (5lf1.pdb1.gz) 2049 Kb
  • LPC: Ligand-Protein Contacts for 5LF1
  • CSU: Contacts of Structural Units for 5LF1
  • Structure Factors (5888 Kb)
  • Retrieve 5LF1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LF1 from S2C, [Save to disk]
  • Re-refined 5lf1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5LF1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lf1] [5lf1_A] [5lf1_B] [5lf1_C] [5lf1_D] [5lf1_E] [5lf1_F] [5lf1_G] [5lf1_H] [5lf1_I] [5lf1_J] [5lf1_K] [5lf1_L] [5lf1_M] [5lf1_N] [5lf1_O] [5lf1_P] [5lf1_Q] [5lf1_R] [5lf1_S] [5lf1_T] [5lf1_U] [5lf1_V] [5lf1_W] [5lf1_X] [5lf1_Y] [5lf1_Z] [5lf1_a] [5lf1_b]
  • SWISS-PROT database:
  • Domain found in 5LF1: [Proteasome_A_N ] by SMART

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