5LJ5		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GTP, MG, ZN	enzyme
Gene Ontology	Chain Function Process Component A metallopeptidase activity B C D F G U2-type catalytic step 2 spl... H J K U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... L M U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... N O U2-type catalytic step 1 spl... P Q R S U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... T U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... W Y h, l j, m k, b n, d p, e q, f r, g s U2-type catalytic step 1 spl... u, w, t, v U2-type catalytic step 1 spl...
Primary reference	Cryo-EM structure of the spliceosome immediately after branching., Galej WP, Wilkinson ME, Fica SM, Oubridge C, Newman AJ, Nagai K, Nature. 2016 Jul 26. doi: 10.1038/nature19316. PMID:27459055

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1760 Kb) [Save to disk] Biological Unit Coordinates (5lj5.pdb1.gz) 1701 Kb LPC: Ligand-Protein Contacts for 5LJ5 CSU: Contacts of Structural Units for 5LJ5 Retrieve 5LJ5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LJ5 from S2C, [Save to disk]

View 5LJ5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5lj5] [5lj5_A] [5lj5_B] [5lj5_C] [5lj5_D] [5lj5_E] [5lj5_F] [5lj5_G] [5lj5_H] [5lj5_I] [5lj5_J] [5lj5_K] [5lj5_L] [5lj5_M] [5lj5_N] [5lj5_O] [5lj5_P] [5lj5_Q] [5lj5_R] [5lj5_S] [5lj5_T] [5lj5_U] [5lj5_V] [5lj5_W] [5lj5_Y] [5lj5_Z] [5lj5_b] [5lj5_d] [5lj5_e] [5lj5_f] [5lj5_g] [5lj5_h] [5lj5_j] [5lj5_k] [5lj5_l] [5lj5_m] [5lj5_n] [5lj5_p] [5lj5_q] [5lj5_r] [5lj5_s] [5lj5_t] [5lj5_u] [5lj5_v] [5lj5_w] [5lj5_x] SWISS-PROT database: Domains found in 5LJ5: [AAA] [Cir_N] [DEXDc] [EFG_C] [EFG_IV] [HA2] [HAT] [HELICc] [JAB_MPN] [LRRcap] [MA3] [MIF4G] [RRM] [SANT] [Sec63] [Sm] [Ubox] [WD40] [cwf21 ] by SMART

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