5LMK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 6ZK, MG, SGM, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A


Primary referenceExplicit treatment of active-site waters enhances quantum mechanical/implicit solvent scoring: Inhibition of CDK2 by new pyrazolo[1,5-a]pyrimidines., Hylsova M, Carbain B, Fanfrlik J, Musilova L, Haldar S, Kopruluoglu C, Ajani H, Brahmkshatriya PS, Jorda R, Krystof V, Hobza P, Echalier A, Paruch K, Lepsik M, Eur J Med Chem. 2017 Jan 27;126:1118-1128. doi: 10.1016/j.ejmech.2016.12.023., Epub 2016 Dec 11. PMID:28039837
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk]
  • Biological Unit Coordinates (5lmk.pdb1.gz) 94 Kb
  • Biological Unit Coordinates (5lmk.pdb2.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 5LMK
  • CSU: Contacts of Structural Units for 5LMK
  • Structure Factors (1216 Kb)
  • Retrieve 5LMK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LMK from S2C, [Save to disk]
  • Re-refined 5lmk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LMK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lmk] [5lmk_A] [5lmk_B] [5lmk_C] [5lmk_D]
  • SWISS-PROT database:

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