5LQ2 Calcium-Binding Protein date Aug 15, 2016
title Crystal Structure Of Tyr24 Phosphorylated Annexin A2 At 3.4 Resolution
authors P.Ecsedi, G.Gogl, B.Kiss, L.Nyitray
compound source
Molecule: Annexin A2
Chain: A, B
Synonym: Annexin II,Annexin-2,Calpactin I Heavy Chain,Calpa Heavy Chain,Chromobindin-8,Lipocortin II,Placental Anticoag Protein Iv,Pap-Iv,Protein I,P36;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Anxa2, Anx2, Anx2l4, Cal1h, Lpc2d
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.197 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.370 99.200 173.020 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.40 Å
ligand CA, PTR enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • phospholipase inhibitor acti...
  • serine-type endopeptidase in...
  • calcium channel activity
  • phospholipase A2 inhibitor a...
  • cadherin binding involved in...


  • Primary referenceRegulation of the Equilibrium between Closed and Open Conformations of Annexin A2 by N-Terminal Phosphorylation and S100A4-Binding., Ecsedi P, Kiss B, Gogl G, Radnai L, Buday L, Koprivanacz K, Liliom K, Leveles I, Vertessy B, Jeszenoi N, Hetenyi C, Schlosser G, Katona G, Nyitray L, Structure. 2017 Aug 1;25(8):1195-1207.e5. doi: 10.1016/j.str.2017.06.001. Epub, 2017 Jun 29. PMID:28669632
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (5lq2.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (5lq2.pdb2.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 5LQ2
  • CSU: Contacts of Structural Units for 5LQ2
  • Structure Factors (312 Kb)
  • Retrieve 5LQ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LQ2 from S2C, [Save to disk]
  • Re-refined 5lq2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LQ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LQ2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lq2_B] [5lq2_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5LQ2
  • Community annotation for 5LQ2 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science