5LVM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADE, DTD, SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBidirectional Allosteric Communication between the ATP-Binding Site and the Regulatory PIF Pocket in PDK1 Protein Kinase., Schulze JO, Saladino G, Busschots K, Neimanis S, Suss E, Odadzic D, Zeuzem S, Hindie V, Herbrand AK, Lisa MN, Alzari PM, Gervasio FL, Biondi RM, Cell Chem Biol. 2016 Sep 28. pii: S2451-9456(16)30302-6. doi:, 10.1016/j.chembiol.2016.06.017. PMID:27693059
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (5lvm.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 5LVM
  • CSU: Contacts of Structural Units for 5LVM
  • Structure Factors (1413 Kb)
  • Retrieve 5LVM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LVM from S2C, [Save to disk]
  • Re-refined 5lvm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LVM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lvm] [5lvm_A]
  • SWISS-PROT database:
  • Domain found in 5LVM: [S_TKc ] by SMART

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