5LXO Structural Protein date Sep 22, 2016
title Coiled-Coil Protein
authors N.Thiyagarajan, T.D.Bunney, M.Katan
compound source
Molecule: Transforming Acidic Coiled-Coil-Containing Protei
Chain: A, B, C, D, E, F, G, H
Synonym: Eric-1
Engineered: Yes
Other_details: Coiled-Coil 2 Domain
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tacc3, Eric1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834
Expression_system_plasmid: Pj821
symmetry Space Group: P 1 21 1
R_factor 0.233 R_Free 0.285
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.250 76.460 86.891 90.00 90.10 90.00
method X-Ray Diffractionresolution 2.18 Å
ligand ACT, CL, MSE, PGE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (5lxo.pdb1.gz) 30 Kb
  • Biological Unit Coordinates (5lxo.pdb2.gz) 29 Kb
  • Biological Unit Coordinates (5lxo.pdb3.gz) 29 Kb
  • Biological Unit Coordinates (5lxo.pdb4.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 5LXO
  • CSU: Contacts of Structural Units for 5LXO
  • Structure Factors (2544 Kb)
  • Retrieve 5LXO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LXO from S2C, [Save to disk]
    • View 5LXO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5LXO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lxo_E] [5lxo_D] [5lxo_G] [5lxo_B] [5lxo_C] [5lxo_F] [5lxo_H] [5lxo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5LXO
  • Community annotation for 5LXO at PDBWiki (http://pdbwiki.org)

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