5LY8		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MG	enzyme
Gene	J1
Primary reference	Evolved distal tail carbohydrate binding modules of Lactobacillus phage J-1: a novel type of anti-receptor widespread among lactic acid bacteria phages., Dieterle ME, Spinelli S, Sadovskaya I, Piuri M, Cambillau C, Mol Microbiol. 2017 Feb 14. doi: 10.1111/mmi.13649. PMID:28196397

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk] Biological Unit Coordinates (5ly8.pdb1.gz) 82 Kb LPC: Ligand-Protein Contacts for 5LY8 CSU: Contacts of Structural Units for 5LY8 Structure Factors (1509 Kb) Retrieve 5LY8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LY8 from S2C, [Save to disk] Re-refined 5ly8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5LY8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ly8] [5ly8_A] SWISS-PROT database:

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