5MD1		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component G, C, D, A, B, E, W, F b, J, H, I, a, f
Primary reference	The structure and flexibility of conical HIV-1 capsids determined within intact virions., Mattei S, Glass B, Hagen WJ, Krausslich HG, Briggs JA, Science. 2016 Dec 16;354(6318):1434-1437. PMID:27980210

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (5md1.pdb1.gz) 99 Kb CSU: Contacts of Structural Units for 5MD1 Retrieve 5MD1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MD1 from S2C, [Save to disk]

View 5MD1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5md1_H] [5md1_I] [5md1_J] [5md1_W] [5md1_a] [5md1_b] [5md1_f] [5md1] [5md1_A] [5md1_B] [5md1_C] [5md1_D] [5md1_E] [5md1_F] [5md1_G] SWISS-PROT database:

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